- Anastasopoulou ΕΤ, Karagkiozidis PS (2012), Climate Change and Biofuels, Environmental Education. Journal of Environmental Protection and Ecology 13:781-788
- Arechavala-Lopez P, Sanchez-Jerez P, Bayle-Sempere JT, Sfakianakis DG, Somarakis S (2012) Discriminating farmed gilthead sea bream Sparus aurata and European sea bass Dicentrarchus labrax from wild stocks through scales and otoliths. Journal of Fish Biology 80:2159-2175
- Arechavala-Lopez P, Sanchez-Jerez P, Bayle-Sempere JT, Sfakianakis DG, Somarakis S (2012), Morphological differences between wild and farmed Mediterranean fish. Hydrobiologia 679:217-231
- Batang ZB, Papathanassiou E, Al-Suwailem A, Smith C, Salomidi M, Petihakis G, Alikunhi N, Smith L, Mallon F, Yapici T, Fayad N (2012), First discovery of a cold seep on the continental margin of the central Red Sea. Journal of Marine Systems 94:247-253
- Bekas P (2012), On the occurrence of the whalesucker Remora australis (Bennett, 1840) in Saronikos Gulf. In M. Thessalou-Legaki et al. (Collective Article). New Mediterranean Biodiversity Records (December 2012). Mediterranean Marine Science 13:320
- Bernal M, Somarakis S, Witthames PR, vanDamme CJG, Uriarte A, Lo NCH, Dickey-Collas M (2012), Egg production methods in marine fisheries: An introduction. Fisheries Research 117-118:1-5
- Breen P, Robinson LA, Rogers SI, Knights AM, Piet G, Churilova T, Margonski P, Papadopoulou N, Akoglu E, Eriksson A, Fineko Z, Fleming-Lehtinen V, Galil B, Goodsir F, Goren M, Kryvenko O, Leppanen JM, Markantonatou V, Moncheva S, Oguz T, Paltriguera L, Stefanova K, Timofte F, Thomsen F (2012), An environmental assessment of risk in achieving good environmental status to support regional prioritisation of management in Europe. Marine Policy 36:1033-1043
- Conides AJ, Nicolaidou A, Apostolopoulou M, Thessalou-Legaki M (2012), Growth, mortality and yield of the mudprawn Upogebia pusilla (Petagna, 1792) (Crustacea: Decapoda: Gebiidea) from Western Greece. Acta Adriatica 53:87-103
- Dickey-Collas M, Somarakis S, Witthames PR, vanDamme CJG, Uriarte A, Lo NCH, Bernal M (2012), Where do egg production methods for estimating fish biomass go from here? Fisheries Research 117-118:6-11
- Dimitriou E, Mentzafou A, Markogianni V, Tzortziou M, Zeri Ch (2012), Geospatial Investigation into Groundwater Pollution and Water Quality Supported by Satellite Data: A Case Study from the Evros River (Eastern Mediterranean). Pure and Applied Geophysics
- Dimitriou E, Mentzafou A, Zogaris S, Tzortziou M, Gritzalis K, Karaouzas I, Nikolaidis Ch (2012), Assessing the environmental status and identifying the dominant pressures of a trans-boundary river catchment, to facilitate efficient management and mitigation practices. Environmental Earth Sciences 66:1839-1852
- Gallart F, Prat N, García-Roger EM, Latron J, Rieradevall M, Llorens P, Barberá GG, Brito D, De Girolamo AM, Lo Porto A, Buffagni A, Erba S, Neves R, Nikolaidis NP, Perrin JL, Querner EP, Quiñonero JM, Tournoud MG, Tzoraki O, Skoulikidis N, Gomez R, Sanchez-Montoya M, Froebrich J (2012), A novel approach to analysing the regimes of temporary streams in relation to their controls on the composition and structure of aquatic biota. Hydrology and Earth System Sciences 16:3165-3182
- Giakoumi S, Katsanevakis S, Vassilopoulou V, Panayotidis P, Kavadas S, Issaris Y, Kokkali A, Frantzis A, Panou A, Mavromati G (2012), Could European marine conservation policy benefit from systematic conservation planning? Aquatic Conservation: Marine and Freshwater Ecosystems 22(6), 762–775
- Glenn H, Tingley D, Marono S, Holm D, Kell L, Padda G, Edvardsson IR, Asmundsson J, Conides A, Kapiris K, Bezahib M, Wattage P, Kuikka S (2012), Trust in the fisheries scientific community. Marine Policy 36:54-72
- Guillen J, Maynou F, Floros C, Sampson D, Conides A, Kapiris K (2012), A bio-economic evaluation of the potential for establishing a commercial fishery on two newly developed stocks: The Ionian red shrimp fishery. Scientia Marina 76:597-605
- Issaris Y, Katsanevakis S, Pantazi M, Vassilopoulou V, Panayotidis P, Kavadas S, Kokkali A, Salomidi M, Frantzis A, Panou A, Damalas D, Klaoudatos D, Sakellariou D, Drakopoulou V, Kyriakidou C, Maina I, Fric J, Smith C, GIakoumi S, Karris G (2012), Ecological mapping and data quality assessment for the needs of ecosystem-based marine spatial management: case study Greek Ionian Sea and the adjacent gulfs. Mediterranean Marine Science 13:297-311
- Issaris Y, Katsanevakis S, Salomidi M, Tsiamis K, Katsiaras N, Verriopoulos G (2012), Occupancy estimation of marine species: dealing with imperfect detectability. Marine Ecology Progress Series 435:95-106
- Kapiris K, Katağan T, Ateş S, Conides A (2012), Review of alien decapods (Crustacea) in the Aegean Sea. Journal of the Black Sea / Mediterranean Environment 18:177-187
- Katsafados P, Kalogirou S, Papadopoulos A, Korres G (2012), Mapping long-term atmospheric variables over Greece. Journal of Maps, 8: 181-184
- Klaoudatos D, Anastasopoulou A, Papaconstantinou C, Conides A (2012) The Greek Experience of Artificial Reef Construction and Management. Journal of Environmental Protection and Ecology 13:1647-1655
- Koutsikos N, Zogaris S, Vardakas L, Tachos V, Kalogianni E, Šanda R, Chatzinikolaou Y, Giakoumi S, Economidis PS, Economou AN (2012), Recent contributions to the distribution of the freshwater ichthyofauna in Greece. Mediterranean Marine Science 13:268-277
- Lefkaditou E, Tsigenopoulos CS, Alidromiti C, Haralabous J (2012), On the occurrence of Alloteuthis subulata in the Eastern Ionian Sea and its distinction from the sympatric Alloteuthis media. Journal of Biological Research-Thessaloniki 17:169-175
- Maggioni V, Anagnostou EN, Reichel R (2012), The impact of model and rainfall forcing errors on characterizing soil moisture uncertainty in land surface modeling. Hydrology and Earth System Science 16:1-17
- Maggioni V, Reichel R, Anagnostou EN (2012), The impact of rainfall error characterization on the estimation of soil moisture fields in a land data assimilation system. Journal of Hydrometeorology 13:1107-1118
- Maravelias CD, Tserpes G, Pantazi M, Peristeraki N (2012), Habitat selection and temporal abundance fluctuations of common demersal cartilaginous fish in the Aegean Sea (eastern Mediterranean). PLoS ONE 7(4):e35474
- Miliou H, Kapiris K, Castritsi-Catharios I (2012), Microplanktic assemblages (sarcodines and alveolates) in the central and southeastern Aegean Sea (NE Mediterranean). Microplanktic assemblages (sarcodines and alveolates) in the central and southeastern Aegean Sea (NE Mediterranean). International Journal of Fisheries and Aquaculture 4:105-113
- Moncheva S, Pantazi M, Pautova L, Boicenco L, Vasiliu D, Mantzosh L (2012), Black Sea phytoplankton data quality–problems and progress. Turkish Journal of Fisheries and Aquatic Sciences 12:417-422
- Nikolioudakis N, Isari S, Pitta P, Somarakis S (2012), Diet of sardine Sardina pilchardus: an “end-to-end” field study. Marine Ecology Progress Series 453:173-188
- Papavlasopoulou I, Perdikaris C, Vardakas L, Paschos (2012), Enemies at the gates of biodiversity: aquarium trade of freshwater crayfish in Greece. Central European Journal of Biology
- Papadopoulos VP, Bartzokas A, Chronis T, Georgopoulos D, Ferentinos G (2012), Factors regulating the air-sea heat fluxes in the Aegean Sea. Journal of Climate, 25:491-508
- Politikos DV, Tzanetis DE, Nikolopoulos CV, Maravelias CD (2012), The application of an age-structured model to the north Aegean anchovy fishery: an evaluation of different management measures. Mathematical Biosciences 237:17-27
- Raitsos DE, Korres G, Triantafyllou G, Petihakis G, Pantazi M, Tsiaras K, Pollani A (2012), Assessing chlorophyll variability in relation to the environmental regime in Pagasitikos Gulf, Greece. Journal of Marine Systems 94:S16-S22
- Rockmann S, Ulrich C, Dreyer M, Bell E, Borodzicz E, Haapasaari P, Hiis-Hauge K, Howell D, Mantyniemi S, Miller D, Tserpes G, Pastoors M (2012), The added value of participatory modelling in fisheries management – what has been learnt? Marine Policy 36:1072–1085
- Salomidi M, Katsanevakis S, Borja Á, Braeckman U, Damalas D, Galparsoro I, Mifsud R, Mirto S, Pascual M, Pipitone C, Rabaut M, Todorova V, Vassilopoulou V, Vega Fernández T (2012). Assessment of goods and services, vulnerability, and conservation status of European seabed biotopes: a stepping stone towards ecosystem-based marine spatial management. Mediterranean Marine Science 13(1): 49-88
- Schismenou E, Somarakis S, Thorsen A, Kjesbu OS (2012), Dynamics of de novo vitellogenesis in fish with indeterminate fecundity: an application of oocyte packing density theory to European anchovy, Engraulis encrasicolus. Marine Biology 159:757-768
- Simboura N, Zenetos A, Pancucci-Papadopoulou MA, Reizopoulou S, Streftaris N (2012), Hellenic Seas indicators for Sea-floor integrity under the European Marine Strategy Framework Directive: setting the thresholds and standards for Good Environmental Status. Mediterranean Marine Science 13:140-152
- Somarakis S, Schismenou E, Siapatis A, Giannoulaki M, Kallianiotis A, Machias A (2012), High variability in the Daily Egg Production Method parameters of an eastern Mediterranean anchovy stock: Influence of environmental factors, fish condition and population density. Fisheries Research 117-118:12-21
- Stampoulis D, Anagnostou EN (2012), Evaluation of Global Satellite Rainfall Products over Continental Europe. Journal of Hydrometeorology 13:588-603
- Thessalou-Legaki M, Aydogan Ö, Bekas P, Bilge G, Boyaci YÖ, Brunelli E, Circosta V, Crocetta F, Durucan F, Erdem M, Ergolavou A, Filiz H, Fois F, Gouva E, Kapiris K, Katsanevakis S, Kljajić Z, Konstantinidis E, Κonstantinou G, Koutsogiannopoulos D, Lamon S, Mačić V, Mazzette R, Meloni D, Mureddu A, Paschos I, Perdikaris C, Piras F, Poursanidis D, Ramos-Esplá AA, Rosso A, Sordino P, Sperone E, Sterioti A, Taşkin E, Toscano F, Tripepi S, Tsiakkiros L, Zenetos A (2012), New Mediterranean Biodiversity Records (December 2012) [Documentation on the establishment of Percnon gibbesi (H. Milne Edwards, 1853) (Crustacea: Decapoda: Brachyura) in Cyprus (Eastern Mediterranean)]. Mediterranean Marine Science 13(2):312-327
- Tsagarakis K, Giannoulaki M, Somarakis S, Machias A (2012), Variability in positional, energetic and morphometric descriptors of European anchovy (Engraulis encrasicolus) schools related to patterns of diurnal vertical migration. Marine Ecology Progress Series 446:243-258
- Tsagarakis K, Pyrounaki MM, Giannoulaki M, Somarakis S, Machias A (2012), Ontogenetic shift in the schooling behaviour of sardine (Sardina pilchardus). Animal Behaviour 84:437-443
- Tsagarakis K, Vassilopoulou V, Kallianiotis A, Machias A (2012), Discards of the purse seine fishery targeting small pelagic fish in the eastern Mediterranean Sea. Scientia Marina 76:561-572
- Tserpes G, Peristeraki P (2012), Albacore catch rate variations in the Greek drifting longline fisheries. ICCAT Collective Volume of Scientific Papers 68(2):492-495
- Tserpes G, Maravelias CD, Pantazi M, Peristeraki N (2012), Distribution of relatively rare demersal elasmobranchs in the Eastern Mediterranean. Estuarine Coastal and Shelf Science 117:48-53
- Vanhove MPM, Economou AN, Zogaris S, Larmuseau MHD, Giakoumi S, Kalogianni E, Volckaert FAM, Huyse T (2012), Phylogenetics and biogeography of the Balkan ‘sand gobies’ (Teleostei: Gobiidae): vulnerable species in need of taxonomic revision. Biological Journal of the Linnean Society 105:73-91
- Velea L, Chronis TG, Anagnostou EN, Papadopoulos A (2012), Comparative analysis of humidity characteristics for open-sea and coastal areas in the Mediterranean. Atmospheric Research 113: 126-139
- Zampieri M, Serpetzoglou E, Anagnostou EN, Nikolopoulos EI, Papadopoulos A (2012), Improving the Representation of River-Groundwater Interactions in Land Surface Modeling at the Regional Scale: Observational Evidence and Parameterization Applied in the Community Land Model. Journal of Hydrology 420–421:72-86
- Zenetos Α, Gofas S, Morri C, Rosso A, Violanti D, et al. (2012), Alien species in the Mediterranean Sea by 2012.A contribution to the application of European Union’s Marine Strategy Framework Directive (MSFD). Part 2. Introduction trends and pathways. Mediterranean Marine Science 13:328-352
- Zogaris S, Chatzinikolaou Y, Koutsikos NE, Economou AN, Oikonomou E, Michaelides G, Hadjisterikotis E, Beaumont WRC, Ferreira MT (2012), Freshwater fish assemblages in Cyprus with emphasis on the effects of dams. Acta Ichthyologica et Piscatoria 42:165-175